Aquatic invasive species information
Waterton Lakes National Park
All non-motorized watercraft from outside of the park are prohibited from launching in water bodies in Waterton Lakes National Park. View 2025 regulations
Report all sightings of aquatic invasive species by contacting wlfuaisprevention-eaiprevention@pc.gc.ca.
Aquatic invasive species (AIS) pose a growing risk to Waterton Lakes National Park. Protecting park waters is a collective responsibility and prevention is key.
Parks Canada relies on the support of all visitors to respect closures to ensure the wellbeing of aquatic ecosystems. It’s important to understand what the AIS of greatest concern are, how they spread, and how you can help. Read on!
Whirling Disease
Status: Present in Waterton Lakes (Belly River watershed)
Whirling disease, caused by the parasite Myxobolus cerebrali, can lead to upwards of 90% mortality in juvenile trout and whitefish populations.
Affected fish may exhibit any of the following signs: swimming in a whirling pattern, skeletal deformities of the body or head, and the tail may appear dark or even black.There is no treatment for whirling disease. Once introduced, the elimination of the parasite in fish populations is not usually possible.
Preventing the further spread of whirling disease in Waterton Lakes is critical for maintaining healthy fish populations.
How does whirling disease spread?
The parasite that causes whirling disease has a complex life cycle involving a worm host (Tubifex tubifex). The parasite lives in the worm host for a period before leaving the worm and free-swimming in the water column where it can then encounter and infect fish. Whirling disease can be spread by moving infected live fish or fish parts from one location to another. It can spread through contaminated water droplets, sand, silt, ballasts, and all water equipment. It may be extremely difficult to clear infectious material from watercraft and fishing gear.
How is whirling disease detected?
Diagnosing whirling disease requires laboratory testing of fish or water samples. Not all infected fish show signs of disease. It is also possible for fish to have signs consistent with whirling disease that are due to other causes.
In addition to the 2023 detection in the Belly River here in Waterton, whirling disease has also been detected in Yoho National Park. Finding the disease in Yoho is the first instance of whirling disease both in British Columbia and in a Pacific-draining watershed.
Does whirling disease harm humans?
The parasite that causes whirling disease does not affect humans or animals other than salmonid fish, such as trout. There is no risk associated with swimming or eating fish caught from infected waters.
Invasive freshwater mussels
Status: Not present in Waterton Lakes or Alberta (highest concern)
Species of greatest concern: Quagga (Dreissena bugensis); Zebra (Dreissena polymorpha); Golden (Limnoperna fortune)
Invasive zebra and quagga mussels were first introduced into North America in the 1980s from Europe. Quagga and zebra mussels are small, fan-shaped, and are dark brown to white in colour. These fingernail-sized freshwater mollusks produce millions of eggs and can number in the tens of thousands per square metre. Dense colonies can make shorelines unusable due to their sharp shells and unpleasant odour.
In 2024, the golden mussel (native to China) was detected in California. This was the first detection in North America. Although this mussel is similar in appearance and impacts to quagga and zebra mussels, it can establish in waters with wider temperature and salinity ranges.
As highly efficient filter feeders, invasive mussels deplete the water of the essential nutrients that native species need to survive. This affects the entire food web, impacting plant and animal life in the region, and altering water chemistry and clarity.
Infestations are likely permanent and irreversible. No method, technology or natural predator exists to remove invasive mussels once established.
How do invasive mussels spread?
Microscopic larvae (called veligers) float and follow water currents until settling on a solid surface. They can easily affect waterways downstream and connected to an invaded area.
Zebra and quagga mussels can survive out of water for up to several weeks in high humidity. Mussels and other aquatic invasive species can inadvertently be moved by attaching to boats, equipment, and trailers. Standing or trapped water in boats may contain its microscopic larva. Once in a watershed, transmission downstream is inevitable.
Have invasive mussels been found in or nearby Waterton?
To date, invasive mussels have not been detected in Waterton Lakes National Park. Parks Canada regularly tests for invasive mussels. This includes microscopic plankton tows, visual shoreline checks and the deployment of artificial substrate samplers which are checked regularly for adult mussel growth. Active environmental DNA monitoring for is also conducted for invasive mussel veligers.
Invasive mussels are found in Quebec, Ontario, Manitoba, and 34 U.S. states, including Idaho. In 2023, invasive mussels were detected in Riding Mountain National Park, Manitoba.
What is the threat of invasive mussels to native species?
Invasive mussels are a serious and permanent threat to park waters. The Waterton Lakes chain is home to the threatened bull trout (Salvelinus confluentus), and are the only known lakes with lake trout, pygmy whitefish (Prosopium coulteri), opossum shrimp (Mysis diluviana), and deepwater sculpin (Myoxocephalus thompsonii) naturally co-occurring.
The pygmy whitefish in the Waterton Lakes chain are considered a unique population and designated as Special Concern by the Committee on the Status of Endangered Wildlife in Canada. Upper Waterton Lake is also the only known location of deepwater sculpin in Alberta.
What are the impacts of invasive mussels outside the park?
The headwaters of the South Saskatchewan River Basin are in Waterton Lakes National Park. An infestation could threaten irrigation networks for southern Alberta’s agricultural industry, water infrastructure for numerous jurisdictions including the cities of Lethbridge and Medicine Hat, and other recreational areas.

Didymo (Didymosphenia geminata)
Status: Present in Waterton Lakes
Also called rock snot, this freshwater alga looks similar to wet toilet paper and has the feel of wet wool. It attaches to rocks in streams, blanketing important habitat for fish, invertebrates, and plants.
Felt-soled wading boots (prohibited in Waterton Lakes National Park) and other water gear are a common way for didymo to spread.
Eurasian water milfoil (Myriophyllum spicatum)
Status: Not present in Waterton Lakes (high concern)
A perennial submersed aquatic plant native to Eurasia and North Africa. First observed in British Columbia in 1970 in Okanagan Lake, it has spread to all main lakes in the Okanagan Valley, and to water bodies in the Lower Mainland and Vancouver Island.
Although not currently present in Alberta, new colonies form from a single stem, seed or leaf. Eurasian milfoil forms thick layers that shade out native plants and decrease oxygen levels as they decay.
Spiny waterflea (Bythotrephes longimanus)
Status: Not present in Waterton Lakes
This invasive zooplankton forms large, jelly-like masses and competes with native species for food. It can lead to large declines in native zooplankton. Their long tails and spines make them a non-desirable food source to native species, allowing the establishment of large infestations.
This invasive species is found in all five Great Lakes and more than 100 other water bodies in Ontario. Lake Winnipeg in Manitoba and several inland U.S. waterbodies surrounding the Great Lakes have also reported its presence.
Other species of concern in Alberta
Phragmites, Goldfish, Prussian Carp, Chinese Mystery Snail, and Northern Crayfish are some of the AIS found elsewhere in Alberta that pose a threat to Waterton Lakes. Visit the Alberta Invasive Species Council for additional information on aquatic and terrestrial (land-based) invasives found in the province.
Frequently asked questions
What can I do to help prevent the spread of aquatic invasive species?
Prevention is critical. It is important to follow all regulations regarding prohibited watercraft, both motorized and human-powered. For water toys, fishing and scuba gear, always clean, drain, dry and certify.
How else is Parks Canada working to protect the park and region from AIS?
Parks Canada protects aquatic ecosystems by monitoring, public education, and implementing programs for all types of watercraft and equipment. Staff, researchers, and contractors must follow strict decontamination rules for gear when working in park waters.
Parks Canada is collaborating closely with the U.S. National Park Service and Alberta Environment and Protected Areas to monitor for aquatic invasive species.
What is the U.S. National Park Service doing in Glacier National Park?
Parks Canada is collaborating closely with the U.S. National Park Service in Glacier National Park to monitor for invasive species. The park service has implemented mandatory inspections and other measures for watercraft.
What can I do if I think I have found aquatic invasive species?
Report all sightings of aquatic invasive species by contacting wlfuaisprevention-eaiprevention@pc.gc.ca. Include information on the date, time, and location of your observation, a description of the species (e.g. color, shape, behavior), and any photos taken.
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